Publications

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2019
July
PDF DNA assembly for nanopore data storage readout.
Randolph Lopez, Yuan-Jyue Chen, Siena Dumas Ang, Sergey Yekhanin, Konstantin Makarychev, Miklos Z Racz, Georg Seelig, Karin Strauss, and Luis Ceze.
Nature Communications 10(2933).
2019
May
PDF Molecular digital data storage using DNA.
Luis Ceze, Jeff Nivala, and Karin Strauss.
Nature Reviews Genetics.
2019
April
PDF Puddle: A Dynamic, Error-Correcting, Full-Stack Microfluidics Platform.
Max Willsey, Ashley P. Stephenson, Chris Takahashi, Pranav Vaid, Bichlien H. Nguyen, Michal Piszczek, Christine Betts, Sharon Newman, Sarang Joshi, Karin Strauss, and Luis Ceze.
Proceedings of the Twenty-Third International Conference on Architectural Support for Programming Languages and Operating Systems (ASPLOS '19).
2019
April
PDF High density DNA data storage library via dehydration with digital microfluidic retrieval.
Sharon Newman, Ashley P Stephenson, Max Willsey, Bichlien H Nguyen, Christopher N Takahashi, Karin Strauss, and Luis Ceze.
Nature Communications 10(1).
2019
March
PDF Demonstration of End-to-End Automation of DNA Data Storage.
Christopher N Takahashi, Bichlien H Nguyen, Karin Strauss, and Luis H Ceze.
Scientific Reports.
2019
January
PDF DNA Data Storage and Hybrid Molecular-Electronic Computing.
Douglas Carmean, Luis Ceze, Georg Seelig, Kendall Stewart, Karin Strauss, and Max Willsey.
Proceedings of the IEEE 107(1).
[preprint]
2018
October
PDF A Content-Addressable DNA Database With Learned Sequence Encodings.
Kendall Stewart, Yuan-Jyue Chen, David Ward, Xiaomeng Liu, Georg Seelig, Karin Strauss, and Luis Ceze.
24th International Conference On DNA Computing and Molecular Programming (DNA24).
2018
February
PDF Random access in large-scale DNA data storage.
Lee Organick, Siena Dumas Ang, Yuan-Jyue Chen, Randolph Lopez, Sergey Yekhanin, Konstantin Makarychev, Miklos Z. Racz, Govinda Kamath, Parikshit Gopalan, Bichlien Nguyen, Christopher Takahashi, Sharon Newman, Hsing-Yeh Parker, Cyrus Rashtchian, Kendall Stewart, Gagan Gupta, Robert Carlson, John Mulligan, Douglas Carmean, Georg Seelig, Luis Ceze, and Karin Strauss.
Nature Biotechnology.
2017
November
PDF Clustering Billions of Reads for DNA Data Storage.
Cyrus Rashtchian, Konstantin Makarychev, Miklos Racz, Siena Ang, Djordje Jevdjic, Sergey Yekhanin, Luis Ceze, and Karin Strauss.
NIPS.
2017
August
PDF Computer Security, Privacy, and DNA Sequencing: Compromising Computers with Synthesized DNA, Privacy Leaks, and More.
Peter Ney, Karl Koscher, Lee Organick, Luis Ceze, and Tadayoshi Kohno.
USENIX Security.
2017
March
PDF Scaling up DNA data storage and random access retrieval.
Lee Organick, Siena Dumas Ang, Yuan-Jyue Chen, Randolph Lopez, Sergey Yekhanin, Konstantin Makarychev, Miklos Z. Racz, Govinda Kamath, Parikshit Gopalan, Bichlien Nguyen, Christopher Takahashi, Sharon Newman, Hsing-Yeh Parker, Cyrus Rashtchian, Kendall Stewart, Gagan Gupta, Robert Carlson, John Mulligan, Douglas Carmean, Georg Seelig, Luis Ceze, and Karin Strauss.
bioRxiv. Accepted for publication at Nature Biotechnology.
2016
April
PDF A DNA-Based Archival Storage System.
James Bornholt, Randolph Lopez, Karin Strauss, Douglas M Carmean, Luis Ceze, Georg Seelig, and Karin Strauss.
International Conference on Architectural Support for Programming Languages and Operating Systems (ASPLOS). Selected for IEEE Micro Top Picks 2016.